MIA: Microscopic Image Analyzer#

MIA is an open source, stand-alone software based on deep learning for the analysis of bioimaging data.

As the name suggest MIA is designed for microscopic imaging data, yet the software can be use for a wide range of imaging data.

Features:

  • Labelling of training data with multiple tools including assisted and automatic labelling

  • Including different applications: Classification, Segmentation, object Object Detection and Tracking

  • Pipeline for neural network Training with several hyperparameters to optimize and fine tune network performance

  • Multiple implemented network architectures and pretrained models

  • Model predictions and the option to correct and improve results

  • Compatibility with other open source projects like ImageJ or CellProfiler

  • Runs on windows and linux